Software

 PATROCLES
A database of polymorphic miRNA  mediated gene  regulation

Reference: Hiard et al., 2010.
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 PHASEBOOK
Phasing marker genotypes using familial (LINKPHASE, LINKPHASE3), population information (HiddenPHASE/DAGPHASE)
or both (DUALPHASE)

Reference: Druet & Georges, 2010
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CHROMIBD

Estimation of Identity-by-Descent probabilities between haplotypes and their genotyped ancestors

Reference: Druet & Farnir, 2011
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GLASCOW
Haplotype-based association mapping for binary traits in structured populations

Reference: Zhang et al., 2012
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SWEEPY
Detection of regions of reduced heterozygosity potentially associated with selective sweeps

Reference: Druet et al., 2013
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